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object --+
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DNA_definition
Spyder-generated class
module atom
file /home/sjoerd/Spyder-devel/atom/DNA.spy
TODO documentation
http://www.spyderware.nl/wiki/classes/DNA_definition
>>> assert puckergroup == None or len(puckergroup) == 4 assert dihedralgroup == None or len(dihedralgroup) == 4 assert(dna_pick_wc != basepair_planar) for g in puckergroup: mustexist = (dna_pick_pucdih == False and g.form == "other") assert mustexist == (nu2 != None) for g in dihedralgroup: mustexist = (dna_pick_bacdih == False and g.form == "other") assert mustexist == (alpha != None) >>>
>>> LENGTH puckergroup 4 LENGTH dihedralgroup 4 >>>
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| Bool |
basepair_planar = True
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| Bool |
dna_pick_wc = False
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| Bool |
dna_pick_dih = True
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| Float |
wc_low = 0.05
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| Float |
wc_up = 0.05
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| Float |
wc_low_uri = 0.01
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| Float |
wc_up_uri = 0.01
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| Float |
c1_low = 0.05
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| Float |
c1_up = 0.05
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| BasePlanarSpecification | bases_planar | ||
| Bool |
dna_pick_puckdih = False
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| DNABasePuckerGroupArray | puckergroup | ||
| DNABaseDihedralGroupArray | dihedralgroup | ||
| BasePairArray | bp | ||
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Inherited from |
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| Generated by Epydoc 3.0.1 on Mon May 10 22:45:16 2010 | http://epydoc.sourceforge.net |